In such cases...
In such cases, science discovers a certain thing with characteristics that are either apparently contradictory to some philosophical laws so that the removal of this opposition would create some new issues for philosophy or, at the least, application of clear principles of philosophy to which will necessitate a new intellectual analysis.
For example, the discovery of energy, the consequent appearance of the theory of the transformation of matter into energy and the emergence of particles of matter from condensed energy have the raised the questions in philosophy as to what the essence of energy is. Does it have mass or not? If it does, what differentiates it from ordinary bodies? If not, how can something possessing mass change into something that has no mass?
In any case, a new material form that has not been discussed in philosophy heretofore has to be accounted for. The Scientific Theory as a step to Philosophical Demonstration In such cases the philosophical issue is discussed on the basis of tangible or intuitive issues or according to previous philosophical discussions, rather than on the basis of scientific presuppositions.
However, the philosopher in his attempt to prove the validity of the philosophical position must depend on the scientific theory as one the premises of his demonstration. On other words, in these cases the philosophical question has only a rational-experiment solution. For example, in the philosophy of Avicenna, in order to prove that the number of the abstract immaterial incorporeal existents is ten, the Ptolemaic geocentric theory is employed.
The Scientific Theory determines the Extensions of the Philosophical Theory In these cases, in the premises used in proving a certain philosophical theory or in the philosophical theory itself the philosopher employs a concept that has a tangible extension, such as the concept of body, the concept of expansion and the concept of contraction, which in the old physics were called ‘penetration’ and ‘condensation’.
The role of the scientific the scientific theory is to make the extension of that concept known to the philosopher. For example, the atomic theory, at the time of its advent, showed that the true extensions of the body in different philosophical precepts proved for body are not these observed bodies, but rather the electrons and nuclei.