However...
However, eventually the Church and papal institution were forced to withdraw in shame. The ruthless fanatical behavior of the Catholic Church had no effect but to give the people a negative attitude toward the authorities of the Church, and in general toward religion, and likewise the downfall of scholastic philosophy, that is, the only current philosophy of that period, brought about an intellectual and philosophical vacuum, and finally the appearance of modern skepticism.
During this process, the only thing that made progress was humanism, and a desire for natural and empirical science in the cultural arena, and a tendency toward liberalism and democracy in the field of politics.
The Second Phase of Skepticism For centuries, the Church had spread the views and ideas of some philosophers as religious beliefs, and Christians had accepted them as certain and sacred, including Aristotelian and Ptolemaic views of cosmology which were upset by Copernicus, and other unbiased scholars also realized their invalidity.
We have already mentioned that the dogmatic resistance of the Church and the ruthless behavior of the authorities of the Church with respect to the scientists brought about adverse reaction.
This change in thoughts and beliefs and the toppling of the intellectual and philosophical foundations [of the Middle Ages] brought about a psychological crises in many of the scholars, and raised doubts in their minds such as: how can we be sure that other beliefs we hold are not invalid, and that one day their invalidity will not become evident? How can we know that newly discovered scientific theories will not also be invalidated someday?
Finally, a great scholar named Montaigne denied the value of science and knowledge and he explicitly wrote, how can we be sure that the theory of Copernicus will not be invalidated in the future? He once more expressed the doubts of the skeptics and sophists in a new way, and defended skepticism, and thus another phase of skepticism appeared.
The Peril of Skepticism The attitude of doubt, in addition to being a painful psychological plague, also involves great spiritual and material perils for society. With the denial of the value of knowledge, there can be no hope for the advancement of the sciences and learning, likewise no room remains for moral values and their magnificent role in human life, as religion also loses its intellectual basis.